BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D12LP1|AL425255
(451 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 841 0.0
>3x_Contig1619
Length = 7770
Score = 841 bits (423), Expect = 0.0
Identities = 445/452 (98%), Gaps = 3/452 (0%)
Strand = Plus / Plus
Query: 1 gatccatctaaacctcatgaatataattatagaagcccctcgcggctcatccaaccgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 gatccatctaaacctcatgaatataattatagaagcccctcgcggctcatccaaccgtac 2729
Query: 61 ggttg-atgatgccgcgagggggaagatacagaaagtattctaagtaattacctaccata 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730 ggttggatgatgccgcgagggggaagatacagaaagtattctaagtaattacctaccata 2789
Query: 120 ggtagaataatgattataaataaacactcaatattctttttttttatatatattaavaac 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2790 ggtagaataatgattataaataaacactcaatattctttttttttatatatattaaaaac 2849
Query: 180 tatattaaaaaatatatacaataatatgtattaatgaccccgcgaccatagcatggtcgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2850 tatattaaaaaatatatacaataatatgtattaatgaccccgcgaccatagcatggtcgc 2909
Query: 240 ggggnanacaataatcaatattcttttcatttttattatatatattgtatatgtatataa 299
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2910 ggggaa--caataatcaatattcttttcatttttattatatatattgtatatgtatataa 2967
Query: 300 tatatacattatattccccgcggcacctacactggtgtataccgggtaggagaccgcggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2968 tatatacattatattccccgcggcacctacactggtgtataccgggtaggagaccgcggg 3027
Query: 360 ggaaaaaagatattatattataatmttgataatcataataatctcataaatttatnccag 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 3028 ggaaaaaagatattatattataatattgataatcataataatctcataaatttataccag 3087
Query: 420 ccctcatatgttatatgagggctggtatatat 451
||||||||||||||||||||||||||||||||
Sbjct: 3088 ccctcatatgttatatgagggctggtatatat 3119
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5730
Number of Sequences: 1807
Number of extensions: 5730
Number of successful extensions: 252
Number of sequences better than 1.0e-20: 1
length of query: 451
length of database: 10,358,551
effective HSP length: 16
effective length of query: 435
effective length of database: 10,329,639
effective search space: 4493392965
effective search space used: 4493392965
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)